The Function Biomedical Informatics Research Network Data Repository

作者:David B. Keator; Theo G.M. van Erp; Jessica A. Turner; Gary H. Glover; Bryon A. Mueller; Thomas T. Liu; James T. Voyvodic; Jerod Rasmussen; Vince D. Calhoun; Hyo Jong Lee; Arthur W. Toga; Sarah McEwen; Judith M. Ford; Daniel H. Mathalon; Michele Diaz; Daniel S. O'Leary; H. Jeremy Bockholt; Syam Gadde; Steven G. Potkin
来源:NeuroImage, 2016, 124: 1074-1079.
DOI:10.1016/j.neuroimage.2015.09.003

摘要


The Function Biomedical Informatics Research Network (FBIRN) developed methods and tools for conducting multi-scanner functional magnetic resonance imaging (fMRI) studies. Method and tool development were based on two major goals: 1) to assess the major sources of variation in fMRI studies conducted across scanners, including instrumentation, acquisition protocols, challenge tasks, and analysis methods, and 2) to provide a distributed network infrastructure and an associated federated database to host and query large, multi-site, fMRI and clinical data sets. In the process of achieving these goals the FBIRN test bed generated several multi-scanner brain imaging data sets to be shared with the wider scientific community via the BIRN Data Repository (BDR). The FBIRN Phase 1 data set consists of a traveling subject study of 5 healthy subjects, each scanned on 10 different 1.5 to 4 T scanners. The FBIRN Phase 2 and Phase 3 data sets consist of subjects with schizophrenia or schizoaffective disorder along with healthy comparison subjects scanned at multiple sites. In this paper, we provide concise descriptions of FBIRN's multi-scanner brain imaging data sets and details about the BIRN Data Repository instance of the Human Imaging Database (HID) used to publicly share the data.

  • 单位
    University of California,San Francisco; Duke University medical center; Harvard Medical School; University of California-Los Angeles; Stanford University.; University of California - Los Angeles; University of California,San Diego; University of California San Francisco; The University of Iowa; The University of North carolina at Chapel Hill; STANFORD UNIVERSITY; new; University of California,Irvine; the University of California, Los Angeles.; University of California Los Angeles; Harvard medical school; University of California,Los Angeles; University of IOWA; University of california,Irvine; The University of North Carolina at Chapel Hill; University of southern California; Penn State University; Duke University Medical Center; UNIVERSITY OF CALIFORNIA SAN DIEGO; yale university; Georgia state university; harvard medical school

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