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A brief review of protein-ligand interaction prediction

Zhao, Lingling; Zhu, Yan; Wang, Junjie; Wen, Naifeng; Wang, Chunyu*; Cheng, Liang*
Science Citation Index Expanded
哈尔滨医科大学; 中国医学科学院

摘要

The task of identifying protein-ligand interactions (PLIs) plays a prominent role in the field of drug discovery. However, it is infeasible to identify potential PLIs via costly and laborious in vitro experiments. There is a need to develop PLI computational prediction approaches to speed up the drug discovery process. In this review, we summarize a brief introduction to various computation-based PLIs. We discuss these approaches, in particular, machine learning-based methods, with illustrations of different emphases based on mainstream trends. Moreover, we analyzed three research dynamics that can be further explored in future studies.(c) 2022 The Authors. Published by Elsevier B.V. on behalf of Research Network of Computational and Structural Biotechnology. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).

关键词

Protein-ligand interactions Drug-target binding affinity Drug discovery Machine learning